Contents

NEURON 8.2.4

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Empirically-based simulator for modeling neurons and networks of neurons

Empirically-based simulator for modeling neurons and networks of neurons

Stars: 351, Watchers: 351, Forks: 113, Open Issues: 344

The neuronsimulator/nrn repo was created 7 years ago and the last code push was 44 minutes ago.
The project is popular with 351 github stars!

How to Install neuron

You can install neuron using pip

pip install neuron

or add it to a project with poetry

poetry add neuron

Package Details

Author
Michael Hines, Yale, Blue Brain Project
License
Copyright (c) Michael Hines (BSD compatible)
Homepage
https://neuron.yale.edu/neuron/
PyPi:
https://pypi.org/project/NEURON/
GitHub Repo:
https://github.com/neuronsimulator/nrn

Classifiers

  • Scientific/Engineering
No  neuron  pypi packages just yet.

Errors

A list of common neuron errors.

Code Examples

Here are some neuron code examples and snippets.

GitHub Issues

The neuron package has 344 open issues on GitHub

  • MorphIO for morphology loading
  • Wheels don't support backspace/delete keys in interactive usage with version >= 8.1.0
  • NMODL cannot translate mcna.mod, CoreNEURON does not handle GLOBAL variables correctly
  • Auto-apply formatting
  • Clean headers dependencies in nrn
  • Plot adjustments
  • plotshape issues with Python on mac
  • Voltage clamp delays and a ON/OFF switch
  • docs: several topics
  • New mpi way
  • test_wheels.sh fails on macOS
  • nrn-build-ci: reusable workflow
  • Setuptools: deprecated setuptools.installer and fetch_build_eggs
  • ModelView crashes with channel builder models, e.g. 152028
  • rxd should not be imported unless it's at the request of the user

See more issues on GitHub

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